PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000137573
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family Dof
Protein Properties Length: 303aa    MW: 32687 Da    PI: 11.0343
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000137573genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof114.44.9e-363290361
         zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                   ++alkc rCds ntkfCyynny+ sqPr+fCkaCrryWtkGG lrnvP Ggg+rk k+s
  MDP0000137573 32 QHALKCXRCDSLNTKFCYYNNYNFSQPRHFCKACRRYWTKGGVLRNVPXGGGCRKTKRS 90
                   6789****************************************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074786.0E-243089IPR003851Zinc finger, Dof-type
PfamPF027017.7E-313389IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.1363589IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103773IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MQDIHSVRGG GRFFGGSGGG DPRLRPHQHP NQHALKCXRC DSLNTKFCYY NNYNFSQPRH  60
FCKACRRYWT KGGVLRNVPX GGGCRKTKRS XTKNSSSSSP ISSPSPEXGF STSTCTTASP  120
PATVNHRTQM RNWGQNLKSD PSELXVAKSK YNPGGKRGSK AKLKSGSVSS PSNSSNSSPE  180
SAIFSPSKQN PDKKQRSKPK PKSRSFHSPP DSSNWLTDSP SPPRKSGCLW FFVVYMVVGS  240
GCTTGFIPEV RRRSGSSSPX PNTKTPATTT TSRHHRISSV GPVAAEPVSE SGAHAATRCG  300
EGA
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.123881e-165fruit| leaf| root| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ8572545e-60DQ857254.1 Glycine max Dof4 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008348381.11e-153PREDICTED: dof zinc finger protein DOF3.6-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59983050
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60850.14e-34OBF binding protein 4